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Keyboard and mouse reference

is the Command key on macOS; on Windows and Linux use Ctrl.

Main window

Action macOS Windows / Linux
Reload all data ⌘R Ctrl+R
Close current tab ⌘W Ctrl+W
Close all tabs ⇧⌘W Ctrl+Shift+W
Larger text ⌘= Ctrl+=
Smaller text ⌘- Ctrl+-
Default text size ⌘0 Ctrl+0
Go Back (where you were looking) ⌘[ Alt+←
Go Forward ⌘] Alt+→
Quit ⌘Q Alt+F4

Undo and Redo are on the toolbar.

Panels

Action How
Show or hide a panel Its button in the panel bar, or its name in the View menu
See which panel a bar button belongs to Rest the pointer on the button — the panel pulses
Hide a panel in its header
Pop a panel out into its own window, or dock it back The pop-out button in its header, which reads Dock once the panel is in a window; closing the window docks it too
Move a panel to another edge Right-click its header → Move to …
Resize a panel Drag the divider beside it
A ready-made arrangement View → Layout → Build, Simulate, or Write
Start over View → Layout → Reset Layout

See Arranging the panels.

Diagram

Gesture Effect
Drag on empty canvas Pan
Scroll Zoom
Click Select
/Ctrl + click Add to or remove from the selection
/Ctrl + Alt + drag Lasso-select
Drag a node Move it
Shift while dragging a node Allow it to change place
Alt + drag, state → state New process
Alt + drag, place → state in it New synthesis process
Alt + drag, state → its own place New degradation process
Alt + drag, process → state Add that state as a product
Alt + drag, state → process Add reactant or modifier (asks for the role)
Right-click Context menu for whatever is under the cursor
Drag from the Browser Add a molecule, place, process, or model to the diagram

The Gesture Suggestions bar at the bottom of the diagram names what your current keys will do.

Parameter Explorer

Action Shortcut
Focus the parameter search box ⌘F / Ctrl+F
Clear the search Esc (in the box)

Biology Agent

Action Shortcut
Send the message Enter
New line in a message Shift+Enter
Larger / smaller transcript text ⌘= / ⌘- (Ctrl on Windows and Linux)

Tables and lists throughout

Action Effect
Double-click a symbol in an equation or table Jump to that state, process, or parameter
/Ctrl + click a symbol The same, even in a cell that a double-click would edit
Right-click a symbol A menu item naming the destination — Show state … in the diagram
Double-click a heading in the Notes panel Show that state or process in the diagram
Click a state or process in the Outline Centre the diagram on it
Arrow keys in a Model Realization's tree Show the selected item in the detail panel, as clicking does
Double-click a search result Open it
Drag an experiment onto a MOE Add it to that MOE

The Display Names toggle

Wherever equations or formulas are shown — the MOE equation listing, the Action Items table, the Edit Rate Law dialog — a Display Names toggle swaps S…/P… symbols for state and process names. Formula editors always work in symbols, so turn it off before editing.